Computational Simulation and Analysis of Protein Stability and Interactions
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This course deals with the development of computer code for the simulation and non-linear least squares analysis of experimental macromolecular data including protein stability (chemical and temperature denaturation, single and multiple domain proteins); different types of binding (single site, multiple sites, independent and cooperative binding); linkage between conformational equilibrium and binding; enzyme kinetics and inhibition; kinetics of protein denaturation/aggregation. The course will use Python as the programing language. Requirements for this course include: 1) Basic Python programing skills; 2) Calculus; 3) Students must have a basic understanding of conformational equilibrium, binding equilibrium and enzyme kinetics. If not sure, please talk to the Instructor.
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